PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.60TXP
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 222aa    MW: 24865.1 Da    PI: 6.2377
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.60TXPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.53e-082366344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      WT e d+ + +a    + +   +W++Ia+ ++ g+++ ++++r+
      Aradu.60TXP 23 HWTREQDKVFERALLFVPEDlpdRWDKIAEQVP-GKSAVDVRDRY 66
                     6*****************99*************.**********9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.5151670IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.3E-61871IPR009057Homeodomain-like
SMARTSM007173.0E-72072IPR001005SANT/Myb domain
SuperFamilySSF466891.5E-122278IPR009057Homeodomain-like
PfamPF002494.7E-72367IPR001005SANT/Myb domain
CDDcd001677.85E-72470No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MFQETAAVAT RWGTEAVEVR MNHWTREQDK VFERALLFVP EDLPDRWDKI AEQVPGKSAV  60
DVRDRYEALV RDVYEIDSGR VEVPSYSDDS AGSGGGGGGG GGLSSWDSAN QISFGSKPRN  120
SDNERKKGTP WTEEEHRTPT QVASHAQKYF LRQNSGKKER KRSSIHDITT VDSNSVPVPV  180
DQNWVAPPQQ EMQQQQQQHH QHFNPHNHVG AGGFGYSNYG GF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015941886.11e-126PREDICTED: transcription factor DIVARICATA
SwissprotQ8S9H71e-41DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A151TQ522e-95A0A151TQ52_CAJCA; Myb-like protein J
STRINGGLYMA20G24600.12e-93(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60683251
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.18e-49MYB family protein